STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_01328Ubiquitin carboxyl-terminal hydrolase 34. (2855 aa)    
Predicted Functional Partners:
Trip12
Putative E3 ubiquitin-protein ligase TRIP12.
   
 
 0.913
RPS27A
Ubiquitin-40S ribosomal protein S27a.
   
 0.907
Ash1l
Putative histone-lysine N-methyltransferase ASH1L.
   
 
 0.874
Smg1
Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family.
   
   0.740
Ankrd17
Ankyrin repeat domain-containing protein 17.
   
 0.738
Birc6
Baculoviral IAP repeat-containing protein 6.
   
 0.728
GW7_12548
Ankyrin repeat and KH domain-containing protein 1.
   
 0.704
Ubr5
E3 ubiquitin-protein ligase UBR5.
   
  
 0.700
Nipbl
Nipped-B protein.
   
    0.695
Atrx
Transcriptional regulator ATRX.
   
 0.651
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.