Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arr3 | Cnga1 | G5C276 | G5B8D9 | Arrestin-C. | cGMP-gated cation channel alpha-1. | 0.779 |
Arr3 | Cnga3 | G5C276 | G5BMT8 | Arrestin-C. | Cyclic nucleotide-gated cation channel alpha-3. | 0.779 |
Arr3 | GNGT1 | G5C276 | G5ANK5 | Arrestin-C. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.812 |
Arr3 | GW7_13987 | G5C276 | G5C388 | Arrestin-C. | Intersectin-2. | 0.933 |
Arr3 | GW7_16288 | G5C276 | G5AM27 | Arrestin-C. | Intersectin-1. | 0.892 |
Arr3 | Gak | G5C276 | G5BCK3 | Arrestin-C. | Cyclin G-associated kinase. | 0.934 |
Arr3 | Gnb3 | G5C276 | G5CAR2 | Arrestin-C. | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3. | 0.810 |
Arr3 | Gngt2 | G5C276 | G5C4N7 | Arrestin-C. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.789 |
Arr3 | RCVRN | G5C276 | G5B5H6 | Arrestin-C. | Recoverin. | 0.810 |
Arr3 | Rho | G5C276 | G5BYE3 | Arrestin-C. | Rhodopsin. | 0.941 |
Cnga1 | Arr3 | G5B8D9 | G5C276 | cGMP-gated cation channel alpha-1. | Arrestin-C. | 0.779 |
Cnga1 | GNGT1 | G5B8D9 | G5ANK5 | cGMP-gated cation channel alpha-1. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.814 |
Cnga1 | Gnb3 | G5B8D9 | G5CAR2 | cGMP-gated cation channel alpha-1. | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3. | 0.855 |
Cnga1 | Gngt2 | G5B8D9 | G5C4N7 | cGMP-gated cation channel alpha-1. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.864 |
Cnga1 | RCVRN | G5B8D9 | G5B5H6 | cGMP-gated cation channel alpha-1. | Recoverin. | 0.653 |
Cnga1 | Rho | G5B8D9 | G5BYE3 | cGMP-gated cation channel alpha-1. | Rhodopsin. | 0.686 |
Cnga3 | Arr3 | G5BMT8 | G5C276 | Cyclic nucleotide-gated cation channel alpha-3. | Arrestin-C. | 0.779 |
Cnga3 | GNGT1 | G5BMT8 | G5ANK5 | Cyclic nucleotide-gated cation channel alpha-3. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.814 |
Cnga3 | Gnb3 | G5BMT8 | G5CAR2 | Cyclic nucleotide-gated cation channel alpha-3. | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3. | 0.793 |
Cnga3 | Gngt2 | G5BMT8 | G5C4N7 | Cyclic nucleotide-gated cation channel alpha-3. | Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. | 0.864 |
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