Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cdc7 | Dbf4 | G5ASI5 | G5C4X6 | Cell division cycle 7-related protein kinase. | DBF4-like protein A. | 0.991 |
Cdc7 | GW7_09033 | G5ASI5 | G5C2L6 | Cell division cycle 7-related protein kinase. | Origin recognition complex subunit 2. | 0.879 |
Cdc7 | GW7_12357 | G5ASI5 | G5AW03 | Cell division cycle 7-related protein kinase. | DNA replication licensing factor MCM4. | 0.963 |
Cdc7 | GW7_16249 | G5ASI5 | G5ALM3 | Cell division cycle 7-related protein kinase. | DNA helicase; Belongs to the MCM family. | 0.997 |
Cdc7 | MCM4 | G5ASI5 | G5BHS6 | Cell division cycle 7-related protein kinase. | DNA helicase; Belongs to the MCM family. | 0.996 |
Cdc7 | MCM7 | G5ASI5 | G5AN15 | Cell division cycle 7-related protein kinase. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.997 |
Cdc7 | Mcm3 | G5ASI5 | G5BC79 | Cell division cycle 7-related protein kinase. | DNA helicase; Belongs to the MCM family. | 0.998 |
Cdc7 | Mcm5 | G5ASI5 | G5BPF1 | Cell division cycle 7-related protein kinase. | DNA helicase; Belongs to the MCM family. | 0.999 |
Cdc7 | ORC4 | G5ASI5 | G5B7T9 | Cell division cycle 7-related protein kinase. | Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. | 0.858 |
Cdc7 | ORC6 | G5ASI5 | G5C3N5 | Cell division cycle 7-related protein kinase. | Origin recognition complex subunit 6. | 0.871 |
Dbf4 | Cdc7 | G5C4X6 | G5ASI5 | DBF4-like protein A. | Cell division cycle 7-related protein kinase. | 0.991 |
Dbf4 | GW7_09033 | G5C4X6 | G5C2L6 | DBF4-like protein A. | Origin recognition complex subunit 2. | 0.949 |
Dbf4 | GW7_12357 | G5C4X6 | G5AW03 | DBF4-like protein A. | DNA replication licensing factor MCM4. | 0.849 |
Dbf4 | GW7_16249 | G5C4X6 | G5ALM3 | DBF4-like protein A. | DNA helicase; Belongs to the MCM family. | 0.875 |
Dbf4 | MCM4 | G5C4X6 | G5BHS6 | DBF4-like protein A. | DNA helicase; Belongs to the MCM family. | 0.984 |
Dbf4 | MCM7 | G5C4X6 | G5AN15 | DBF4-like protein A. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.990 |
Dbf4 | Mcm3 | G5C4X6 | G5BC79 | DBF4-like protein A. | DNA helicase; Belongs to the MCM family. | 0.989 |
Dbf4 | Mcm5 | G5C4X6 | G5BPF1 | DBF4-like protein A. | DNA helicase; Belongs to the MCM family. | 0.989 |
Dbf4 | ORC4 | G5C4X6 | G5B7T9 | DBF4-like protein A. | Origin recognition complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. | 0.937 |
Dbf4 | ORC6 | G5C4X6 | G5C3N5 | DBF4-like protein A. | Origin recognition complex subunit 6. | 0.936 |
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