Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIRH1A | Nop56 | G5AK50 | G5B4R9 | Cirhin. | Nucleolar protein 56. | 0.998 |
CIRH1A | RPP38 | G5AK50 | G5C5D7 | Cirhin. | Ribonuclease P protein subunit p38. | 0.996 |
CIRH1A | RPS7 | G5AK50 | G5C7L2 | Cirhin. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.976 |
CIRH1A | Rrp9 | G5AK50 | G5AXN8 | Cirhin. | U3 small nucleolar RNA-interacting protein 2. | 0.999 |
CIRH1A | UTP15 | G5AK50 | G5AMI9 | Cirhin. | U3 small nucleolar RNA-associated protein 15-like protein. | 0.999 |
FAU | Nop56 | G5B6L6 | G5B4R9 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Nucleolar protein 56. | 0.927 |
FAU | RPP38 | G5B6L6 | G5C5D7 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | Ribonuclease P protein subunit p38. | 0.996 |
FAU | RPS7 | G5B6L6 | G5C7L2 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.999 |
FAU | Rrp9 | G5B6L6 | G5AXN8 | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | U3 small nucleolar RNA-interacting protein 2. | 0.851 |
Nop56 | CIRH1A | G5B4R9 | G5AK50 | Nucleolar protein 56. | Cirhin. | 0.998 |
Nop56 | FAU | G5B4R9 | G5B6L6 | Nucleolar protein 56. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.927 |
Nop56 | RPP38 | G5B4R9 | G5C5D7 | Nucleolar protein 56. | Ribonuclease P protein subunit p38. | 0.999 |
Nop56 | RPS7 | G5B4R9 | G5C7L2 | Nucleolar protein 56. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.984 |
Nop56 | Rrp9 | G5B4R9 | G5AXN8 | Nucleolar protein 56. | U3 small nucleolar RNA-interacting protein 2. | 0.999 |
Nop56 | UTP15 | G5B4R9 | G5AMI9 | Nucleolar protein 56. | U3 small nucleolar RNA-associated protein 15-like protein. | 0.998 |
POP5 | Pop4 | G5AWW9 | G5BL45 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. | Ribonuclease P protein subunit p29. | 0.999 |
POP5 | RPP38 | G5AWW9 | G5C5D7 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. | Ribonuclease P protein subunit p38. | 0.996 |
POP5 | Rpp30 | G5AWW9 | G5B100 | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. | Ribonuclease P protein subunit p30. | 0.999 |
Pop4 | POP5 | G5BL45 | G5AWW9 | Ribonuclease P protein subunit p29. | Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. | 0.999 |
Pop4 | RPP38 | G5BL45 | G5C5D7 | Ribonuclease P protein subunit p29. | Ribonuclease P protein subunit p38. | 0.996 |
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