STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lmo7LIM domain only protein 7. (1556 aa)    
Predicted Functional Partners:
Actn1
Alpha-actinin-1.
    
 0.912
GW7_17827
COMM domain-containing protein 6.
     
 0.754
GW7_19823
Emerin.
    
 
 0.697
Nedd8
NEDD8.
   
 0.587
GW7_02759
NEDD8-activating enzyme E1 catalytic subunit.
   
 
 0.564
GW7_17895
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
   
 
  0.559
COMMD5
COMM domain-containing protein 5.
   
 
  0.549
Commd8
COMM domain-containing protein 8.
    
  0.548
GW7_13071
F-box only protein 47.
      
 0.543
GW7_06406
Afadin.
    
 
 0.507
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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