Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ctdsp2 | Dym | G5BEB1 | G5B878 | Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2. | Dymeclin. | 0.567 |
Ctdsp2 | Hhip | G5BEB1 | G5C7E9 | Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2. | Hedgehog-interacting protein. | 0.556 |
Ctdsp2 | Sh3gl3 | G5BEB1 | G5BF00 | Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2. | Endophilin-A3. | 0.567 |
DHH | Gli1 | G5AU29 | G5BED5 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Zinc finger protein GLI1. | 0.846 |
DHH | Hhip | G5AU29 | G5C7E9 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Hedgehog-interacting protein. | 0.997 |
DHH | Ihh | G5AU29 | G5AKL0 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.959 |
DHH | Ptch1 | G5AU29 | G5B6H5 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Patched-like protein 1. | 0.995 |
DHH | Smo | G5AU29 | G5BH88 | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | Smoothened-like protein; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.779 |
Dym | Ctdsp2 | G5B878 | G5BEB1 | Dymeclin. | Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2. | 0.567 |
Dym | Hhip | G5B878 | G5C7E9 | Dymeclin. | Hedgehog-interacting protein. | 0.565 |
Dym | Sh3gl3 | G5B878 | G5BF00 | Dymeclin. | Endophilin-A3. | 0.598 |
F2r | Gli1 | G5ATK7 | G5BED5 | Proteinase-activated receptor 1; Belongs to the G-protein coupled receptor 1 family. | Zinc finger protein GLI1. | 0.454 |
F2r | Hhip | G5ATK7 | G5C7E9 | Proteinase-activated receptor 1; Belongs to the G-protein coupled receptor 1 family. | Hedgehog-interacting protein. | 0.583 |
F2r | Sorl1 | G5ATK7 | G5B7K4 | Proteinase-activated receptor 1; Belongs to the G-protein coupled receptor 1 family. | Sortilin-related receptor. | 0.608 |
Gli1 | DHH | G5BED5 | G5AU29 | Zinc finger protein GLI1. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.846 |
Gli1 | F2r | G5BED5 | G5ATK7 | Zinc finger protein GLI1. | Proteinase-activated receptor 1; Belongs to the G-protein coupled receptor 1 family. | 0.454 |
Gli1 | Hhip | G5BED5 | G5C7E9 | Zinc finger protein GLI1. | Hedgehog-interacting protein. | 0.725 |
Gli1 | Ihh | G5BED5 | G5AKL0 | Zinc finger protein GLI1. | Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. | 0.673 |
Gli1 | Ptch1 | G5BED5 | G5B6H5 | Zinc finger protein GLI1. | Patched-like protein 1. | 0.792 |
Gli1 | Smo | G5BED5 | G5BH88 | Zinc finger protein GLI1. | Smoothened-like protein; Belongs to the G-protein coupled receptor Fz/Smo family. | 0.852 |
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