STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_13169Urokinase-type plasminogen activator. (570 aa)    
Predicted Functional Partners:
Plaur
Urokinase plasminogen activator surface receptor.
   
 0.989
SERPINE1
Plasminogen activator inhibitor 1 isoform 1; Belongs to the serpin family.
   
 0.978
Vtn
Vitronectin.
   
 0.850
Serpine2
Glia-derived nexin; Belongs to the serpin family.
   
 0.832
GW7_11548
Plasminogen; Belongs to the peptidase S1 family.
  
  
0.779
Serpinb2
Plasminogen activator inhibitor 2; Belongs to the serpin family.
    
 0.778
Met
Hepatocyte growth factor receptor.
    
 0.702
Serpinf2
Alpha-2-antiplasmin; Belongs to the serpin family.
    
 0.694
Lrp1
Prolow-density lipoprotein receptor-related protein 1.
    
 
 0.625
GW7_00155
Annexin.
   
 0.605
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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