STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam120bConstitutive coactivator of peroxisome proliferator-activated receptor gamma. (854 aa)    
Predicted Functional Partners:
GW7_11308
Programmed cell death protein 2.
      
 0.678
PSMB1
Proteasome subunit beta.
    
 0.647
GW7_10415
Fanconi anemia group M protein.
    
 0.580
Pold2
DNA polymerase delta subunit 2.
    
 0.553
Mus81
Crossover junction endonuclease MUS81.
    
 0.511
Snrpe
Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.
   
 0.508
Ggps1
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.502
Palb2
Partner and localizer of BRCA2.
    
 0.477
GNPAT
Dihydroxyacetone phosphate acyltransferase.
      
 0.474
GW7_02252
Survival motor neuron protein.
    
 0.470
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.