STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_07345Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)    
Predicted Functional Partners:
Ube2v1
Transmembrane protein 189.
   
 0.916
GW7_00042
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.912
Trip12
Putative E3 ubiquitin-protein ligase TRIP12.
   
 0.884
RPS27A
Ubiquitin-40S ribosomal protein S27a.
   
 0.774
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.758
GW7_09007
E3 ubiquitin-protein ligase RNF8.
   
 0.716
MAP3K7
Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.
   
 0.714
GW7_21014
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
 0.690
Stub1
STIP1-like protein and U box-containing protein 1.
   
 0.688
Hltf
Helicase-like transcription factor.
    
 0.686
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.