STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pddc1Parkinson disease 7 domain-containing protein 1. (226 aa)    
Predicted Functional Partners:
Ppp1r21
KLRAQ motif-containing protein 1.
    
   0.808
Tnni1
Troponin I, slow skeletal muscle.
   
 0.759
GW7_11657
Uncharacterized protein.
   
 0.759
Tnni3
Troponin I, cardiac muscle.
   
 0.759
Tnni2
Troponin I, fast skeletal muscle.
   
 0.759
Myl3
Myosin light chain 3.
   
 0.604
Myl1
Myosin light chain 1, skeletal muscle isoform.
   
 0.604
Myl6
Myosin light polypeptide 6.
   
 0.604
Myl6b
Myosin light chain 6B.
   
 0.604
Myl4
Myosin light chain 4.
   
 0.604
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.