STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prdm6Putative histone-lysine N-methyltransferase PRDM6. (317 aa)    
Predicted Functional Partners:
Camkmt
Uncharacterized protein.
     
 0.901
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform 2.
     
 0.655
Plod1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
  0.650
Prdm14
PR domain zinc finger protein 14.
    
 
0.620
GW7_18441
Protein CBFA2T2.
    
 
 0.551
Cbfa2t2
Protein CBFA2T2.
    
 
 0.551
Kmt5c
Histone-lysine N-methyltransferase SUV420H2.
      
 0.541
Sh3rf3
SH3 domain-containing RING finger protein 3.
    
 0.405
GW7_11982
SET and MYND domain-containing protein 2.
    
 0.401
GW7_10928
Gasdermin-C.
      
 0.400
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.