STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GW7_15881PDZ domain-containing protein 7. (639 aa)    
Predicted Functional Partners:
GW7_11333
Usherin.
    
 
 0.699
GW7_02112
FCH and double SH3 domains protein 2.
    
   0.623
Ush1g
Usher syndrome type-1G protein-like protein.
    
 0.547
Traf3ip1
TRAF3-interacting protein 1.
    
 0.527
GW7_13199
Peripheral plasma membrane protein CASK.
    
 0.509
Cask
Peripheral plasma membrane protein CASK.
    
 0.509
GW7_15880
Tyrosine-protein phosphatase non-receptor type 13.
 
     0.475
GW7_03633
Clusterin-associated protein 1.
    
 0.473
Ift81
Intraflagellar transport protein 81-like protein.
    
 0.467
GW7_08165
Intraflagellar transport protein 57-like protein.
    
 0.466
Your Current Organism:
Heterocephalus glaber
NCBI taxonomy Id: 10181
Other names: H. glaber, naked mole rat, naked mole-rat
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