Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GW7_07258 | GW7_13987 | G5B2B3 | G5C388 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Intersectin-2. | 0.661 |
GW7_07258 | SNAP23 | G5B2B3 | G5BM31 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.404 |
GW7_07258 | Stx1b | G5B2B3 | G5BYD1 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Syntaxin-1B; Belongs to the syntaxin family. | 0.946 |
GW7_07258 | Stx2 | G5B2B3 | G5AWP6 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Syntaxin-2. | 0.892 |
GW7_07258 | Stx4 | G5B2B3 | G5BYD0 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Syntaxin-4; Belongs to the syntaxin family. | 0.916 |
GW7_07258 | Syt1 | G5B2B3 | G5C9J0 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Synaptotagmin-1. | 0.961 |
GW7_07258 | Vamp1 | G5B2B3 | G5CAP4 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Vesicle-associated membrane protein 1. | 0.972 |
GW7_07258 | Vamp2 | G5B2B3 | G5B5F3 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Vesicle-associated membrane protein 2. | 0.995 |
GW7_07258 | Vamp3 | G5B2B3 | G5C553 | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | Vesicle-associated membrane protein 3. | 0.990 |
GW7_13987 | GW7_07258 | G5C388 | G5B2B3 | Intersectin-2. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.661 |
GW7_13987 | Gak | G5C388 | G5BCK3 | Intersectin-2. | Cyclin G-associated kinase. | 0.857 |
GW7_13987 | SNAP23 | G5C388 | G5BM31 | Intersectin-2. | Synaptosomal-associated protein; Belongs to the SNAP-25 family. | 0.563 |
GW7_13987 | Syt1 | G5C388 | G5C9J0 | Intersectin-2. | Synaptotagmin-1. | 0.693 |
GW7_13987 | Vamp1 | G5C388 | G5CAP4 | Intersectin-2. | Vesicle-associated membrane protein 1. | 0.948 |
GW7_13987 | Vamp2 | G5C388 | G5B5F3 | Intersectin-2. | Vesicle-associated membrane protein 2. | 0.948 |
GW7_13987 | Vamp3 | G5C388 | G5C553 | Intersectin-2. | Vesicle-associated membrane protein 3. | 0.948 |
Gak | GW7_13987 | G5BCK3 | G5C388 | Cyclin G-associated kinase. | Intersectin-2. | 0.857 |
Gak | Vamp1 | G5BCK3 | G5CAP4 | Cyclin G-associated kinase. | Vesicle-associated membrane protein 1. | 0.933 |
Gak | Vamp2 | G5BCK3 | G5B5F3 | Cyclin G-associated kinase. | Vesicle-associated membrane protein 2. | 0.933 |
Gak | Vamp3 | G5BCK3 | G5C553 | Cyclin G-associated kinase. | Vesicle-associated membrane protein 3. | 0.931 |
page 1 of 5