STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_024059Cystatin B; Belongs to the cystatin family. (98 aa)    
Predicted Functional Partners:
BpHYR1_043250
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.833
BpHYR1_016986
Bcl-2 1 isoform X1.
    
 0.819
BpHYR1_048055
Bcl-2 1.
    
 0.819
BpHYR1_019557
Caspase; Belongs to the peptidase C14A family.
    
 0.790
BpHYR1_018978
Caspase-7 isoform X1; Belongs to the peptidase C14A family.
    
 0.790
BpHYR1_048292
DNA excision repair haywire.
    
 0.790
BpHYR1_022207
Caspase-2 isoform X1; Belongs to the peptidase C14A family.
    
 0.790
BpHYR1_009467
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.719
BpHYR1_039754
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.719
BpHYR1_043700
Aurora kinase; Belongs to the protein kinase superfamily.
   
 0.719
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.