STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_013552Exosome complex component CSL4. (467 aa)    
Predicted Functional Partners:
BpHYR1_018973
Dihydropyrimidinase-like isoform X7.
    
  0.601
BpHYR1_027023
Dihydropyrimidinase-like isoform X4.
    
  0.601
BpHYR1_046173
Dihydropyrimidinase-like isoform X6.
    
  0.601
BpHYR1_050950
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
     
 0.595
BpHYR1_037599
Glucosamine-6-phosphate isomerase.
     
 0.595
BpHYR1_051877
Copper-transporting ATPase 1 isoform X2.
     
 0.591
BpHYR1_020861
Copper-transporting ATPase 1.
     
 0.591
BpHYR1_037612
OTU domain-containing 3.
     
 0.568
BpHYR1_004694
Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
     
 0.568
BpHYR1_047834
Copper chaperone for superoxide dismutase.
     
 0.560
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.