STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_007085Cysteine--tRNA cytoplasmic isoform X4. (641 aa)    
Predicted Functional Partners:
BpHYR1_026683
Elongation factor 1-gamma; Belongs to the GST superfamily.
   
 0.923
BpHYR1_015470
Elongation factor 1-gamma.
   
 0.923
BpHYR1_049356
Cystathionine gamma-lyase-like.
    
 0.899
BpHYR1_017563
Tyrosine--tRNA ligase.
  
 
 0.852
BpHYR1_008148
Methionine--tRNA cytoplasmic isoform X2; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.844
BpHYR1_008332
Leucine--tRNA cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.828
BpHYR1_049174
Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 1.
    
 0.820
BpHYR1_018887
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.819
BpHYR1_017323
Valine--tRNA mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.812
BpHYR1_045268
Cystathionine beta-synthase-like isoform X1.
   
 0.810
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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