STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_043998DNA mismatch repair Msh2-like; Component of the post-replicative DNA mismatch repair system (MMR). (896 aa)    
Predicted Functional Partners:
BpHYR1_050363
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.999
BpHYR1_025367
DNA mismatch repair Mlh1-like.
 
 0.998
BpHYR1_012900
Mismatch repair endonuclease PMS2.
 
 0.997
BpHYR1_017877
Exonuclease 1-like.
   
 0.995
BpHYR1_017405
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.972
BpHYR1_036970
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.972
BpHYR1_045614
Transposase.
  
 0.927
BpHYR1_036431
Transposase.
  
 0.927
BpHYR1_046927
ISXO2-like domain-containing.
  
 0.927
BpHYR1_034818
Transposase.
  
 0.927
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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