STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_043999Calpain-D-like isoform X1; Belongs to the peptidase C2 family. (967 aa)    
Predicted Functional Partners:
BpHYR1_010225
Leucine-rich repeat and guanylate kinase domain-containing.
    
 
 0.558
BpHYR1_033598
Leucine-rich repeat and guanylate kinase domain-containing isoform X2.
    
 
 0.558
BpHYR1_004143
Talin-2.
    
  0.544
BpHYR1_021353
Talin-2.
    
  0.544
BpHYR1_034043
Programmed cell death 6 isoform X2.
   
 0.485
BpHYR1_001954
Programmed cell death 6.
   
 0.485
BpHYR1_001951
Programmed cell death 6.
   
 0.485
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (26%) [HD]