STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_032742Lamin-B2-like isoform X1. (642 aa)    
Predicted Functional Partners:
BpHYR1_013174
Barrier-to-autointegration factor.
   
 0.741
BpHYR1_039753
Inner nuclear membrane Man1.
    
 0.643
BpHYR1_018978
Caspase-7 isoform X1; Belongs to the peptidase C14A family.
    
 0.634
BpHYR1_022207
Caspase-2 isoform X1; Belongs to the peptidase C14A family.
    
 0.634
BpHYR1_013516
SUN domain-containing 1 isoform X2.
    
 0.581
BpHYR1_019557
Caspase; Belongs to the peptidase C14A family.
    
 0.568
BpHYR1_048292
DNA excision repair haywire.
    
 0.568
BpHYR1_021703
Torsin-1A-interacting 2.
    
  0.553
BpHYR1_035917
WD repeat-containing 48 isoform X2.
      
 0.538
BpHYR1_043160
Rho GTPase-activating 39 isoform X2.
    
  0.530
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.