Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BpHYR1_001190 | BpHYR1_003958 | A0A3M7PAJ9 | A0A3M7RY22 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | 0.897 |
BpHYR1_001190 | BpHYR1_007793 | A0A3M7PAJ9 | A0A3M7PQI7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. | 0.704 |
BpHYR1_001190 | BpHYR1_016075 | A0A3M7PAJ9 | A0A3M7SLN3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA helicase. | 0.935 |
BpHYR1_001190 | BpHYR1_017004 | A0A3M7PAJ9 | A0A3M7PXX7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Nucleolar MIF4G domain-containing 1. | 0.988 |
BpHYR1_001190 | BpHYR1_017132 | A0A3M7PAJ9 | A0A3M7S560 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Bystin. | 0.999 |
BpHYR1_001190 | BpHYR1_024874 | A0A3M7PAJ9 | A0A3M7PFZ0 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Digestive organ expansion factor-like protein. | 0.933 |
BpHYR1_001190 | BpHYR1_028461 | A0A3M7PAJ9 | A0A3M7ST87 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | U3 small nucleolar RNA-associated 6-like protein. | 0.998 |
BpHYR1_001190 | BpHYR1_041215 | A0A3M7PAJ9 | A0A3M7P4I9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA-binding 5. | 0.760 |
BpHYR1_003958 | BpHYR1_001190 | A0A3M7RY22 | A0A3M7PAJ9 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.897 |
BpHYR1_003958 | BpHYR1_007793 | A0A3M7RY22 | A0A3M7PQI7 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. | 0.598 |
BpHYR1_003958 | BpHYR1_016075 | A0A3M7RY22 | A0A3M7SLN3 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | RNA helicase. | 0.825 |
BpHYR1_003958 | BpHYR1_017004 | A0A3M7RY22 | A0A3M7PXX7 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Nucleolar MIF4G domain-containing 1. | 0.563 |
BpHYR1_003958 | BpHYR1_017132 | A0A3M7RY22 | A0A3M7S560 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Bystin. | 0.968 |
BpHYR1_003958 | BpHYR1_024874 | A0A3M7RY22 | A0A3M7PFZ0 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Digestive organ expansion factor-like protein. | 0.856 |
BpHYR1_003958 | BpHYR1_028461 | A0A3M7RY22 | A0A3M7ST87 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | U3 small nucleolar RNA-associated 6-like protein. | 0.898 |
BpHYR1_003958 | BpHYR1_031762 | A0A3M7RY22 | A0A3M7QQ65 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. | 0.807 |
BpHYR1_003958 | BpHYR1_041215 | A0A3M7RY22 | A0A3M7P4I9 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | RNA-binding 5. | 0.853 |
BpHYR1_003958 | BpHYR1_053328 | A0A3M7RY22 | A0A3M7PI62 | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | RNA-binding 25-like. | 0.435 |
BpHYR1_007793 | BpHYR1_001190 | A0A3M7PQI7 | A0A3M7PAJ9 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.704 |
BpHYR1_007793 | BpHYR1_003958 | A0A3M7PQI7 | A0A3M7RY22 | Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. | Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | 0.598 |
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