STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_027389Putative E3 ubiquitin-ligase HECTD2. (266 aa)    
Predicted Functional Partners:
BpHYR1_012173
Tumor 63 isoform X7.
    
 0.791
BpHYR1_026180
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.764
BpHYR1_052182
E3 ubiquitin-ligase TRIP12-like isoform X4.
   
 
0.752
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
   
 0.739
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.735
BpHYR1_010225
Leucine-rich repeat and guanylate kinase domain-containing.
    
  0.724
BpHYR1_033598
Leucine-rich repeat and guanylate kinase domain-containing isoform X2.
    
  0.724
BpHYR1_035646
Tuberin isoform X5.
    
 0.707
BpHYR1_040033
Tuberin isoform X2.
    
 0.707
BpHYR1_013548
UV excision repair RAD23-like protein.
    
 0.705
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.