STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_038581DUF676 domain-containing protein. (594 aa)    
Predicted Functional Partners:
BpHYR1_019363
Putative asparagine--tRNA mitochondrial.
   
  
 0.540
BpHYR1_026536
Cytosolic Fe-S cluster assembly factor NARFL.
      
 0.538
BpHYR1_029662
Tubby-related 4 isoform X1; Belongs to the TUB family.
      
 0.538
BpHYR1_028993
Sorting nexin-18.
      
 0.480
BpHYR1_006998
Bifunctional glutamate proline--tRNA ligase.
      
 0.405
BpHYR1_054443
Quinone oxidoreductase PIG3.
      
 0.400
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.