STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_040108AN1-type zinc finger 2B isoform X1. (244 aa)    
Predicted Functional Partners:
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
    
 
 0.645
BpHYR1_041824
Ubiquitin-60S ribosomal L40.
   
 
 0.637
BpHYR1_049355
Nuclear localization 4-like protein.
    
   0.568
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.562
BpHYR1_041473
26S proteasome non-ATPase regulatory subunit 6.
   
 
 0.562
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.553
BpHYR1_035615
26S protease regulatory subunit 10B; Belongs to the AAA ATPase family.
    
   0.528
BpHYR1_010536
NSFL1 cofactor p47 isoform X1.
    
   0.463
BpHYR1_035033
NSFL1 cofactor p47 isoform X2.
    
   0.463
BpHYR1_000683
UBX domain-containing 11.
    
   0.463
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.