STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_018385Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which may be involved in intracellular homeostatic regulation of pyridoxal 5'- phosphate (PLP), the active form of vitamin B6; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (249 aa)    
Predicted Functional Partners:
BpHYR1_003128
D-aspartate oxidase-like.
    
 0.720
BpHYR1_054289
D-aspartate oxidase.
    
 0.720
BpHYR1_003030
Pyridoxal kinase.
  
  
 0.716
BpHYR1_017563
Tyrosine--tRNA ligase.
   
 
 0.542
BpHYR1_049356
Cystathionine gamma-lyase-like.
  
  
 0.519
BpHYR1_001383
60s ribosomal l35.
  
    0.496
BpHYR1_029458
Sulfite mitochondrial.
     
 0.444
BpHYR1_029461
Sulfite mitochondrial isoform X2.
     
 0.444
BpHYR1_011734
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
    0.434
BpHYR1_045268
Cystathionine beta-synthase-like isoform X1.
  
  
 0.429
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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