STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_031808RNA-directed DNA polymerase from mobile element jockey-like. (785 aa)    
Predicted Functional Partners:
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.767
BpHYR1_010004
BRCA1-associated RING domain 1.
    
 0.643
BpHYR1_018390
10 kDa heat shock mitochondrial; Belongs to the GroES chaperonin family.
    
 0.618
BpHYR1_050966
60S ribosomal L21.
   
   0.560
BpHYR1_052486
26S proteasome non-ATPase regulatory subunit 14.
    
  0.532
BpHYR1_008023
Mitochondrial import receptor subunit TOM40-like protein.
   
  0.530
BpHYR1_047043
39S ribosomal mitochondrial.
   
 
 0.518
BpHYR1_045283
60S ribosomal L13A.
   
   0.497
BpHYR1_051391
39S ribosomal mitochondrial.
   
   0.488
BpHYR1_001187
60S ribosomal L39.
   
   0.477
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.