STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_045821RNA recognition motif domain containing. (226 aa)    
Predicted Functional Partners:
BpHYR1_045416
Serine arginine-rich splicing factor 1B.
   
 0.942
BpHYR1_002368
Serine arginine-rich splicing factor 3 isoform X2.
   
 0.919
BpHYR1_002367
Serine arginine-rich splicing factor 3.
   
 0.919
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.886
BpHYR1_010969
Heterogeneous nuclear ribonucleo K isoform X1.
   
 0.807
BpHYR1_004127
Splicing arginine serine-rich 7.
   
 0.797
BpHYR1_047015
Serine arginine-rich splicing factor 7-like isoform X3.
   
 0.797
BpHYR1_026421
Splicing arginine serine-rich 7.
   
 0.797
BpHYR1_022106
Serine arginine-rich splicing factor 7-like isoform X2.
   
 0.797
BpHYR1_011958
Nuclear cap-binding subunit 1-like.
    
 0.787
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.