STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_015990Ubiquitin carboxyl-terminal hydrolase 45; Belongs to the peptidase C19 family. (274 aa)    
Predicted Functional Partners:
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
    
 0.739
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.726
BpHYR1_012615
Ubiquilin-1 isoform X1.
   
 0.701
BpHYR1_013548
UV excision repair RAD23-like protein.
    
 0.699
BpHYR1_033501
DNA excision repair ERCC-1.
    
 0.696
BpHYR1_038899
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.599
BpHYR1_039319
Ubiquitin carboxyl-terminal hydrolase.
      
 0.578
BpHYR1_002214
Fanconi anemia-associated of 24 kDa.
    
 0.563
BpHYR1_010734
E3 ubiquitin-ligase Topors-like.
   
  
 0.562
BpHYR1_022580
Ubiquitin thioesterase OTU1.
   
  
 0.550
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.