STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_022180Endothelial differentiation-related factor 1-like protein. (150 aa)    
Predicted Functional Partners:
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.990
BpHYR1_011312
40S ribosomal S20.
   
 
 0.975
BpHYR1_010284
40S ribosomal S3.
  
 
 0.974
BpHYR1_001359
Guanine nucleotide-binding subunit beta-2-like 1.
   
 
 0.971
BpHYR1_009755
40S ribosomal S9.
   
   0.967
BpHYR1_014586
40S ribosomal S10b.
   
 
 0.966
BpHYR1_016582
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.964
BpHYR1_023404
40S ribosomal S2; Belongs to the universal ribosomal protein uS5 family.
  
   0.963
BpHYR1_027209
40S ribosomal S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.962
BpHYR1_050217
40S ribosomal S5; Belongs to the universal ribosomal protein uS7 family.
   
   0.960
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.