STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_012558Amidase. (559 aa)    
Predicted Functional Partners:
BpHYR1_026981
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.991
BpHYR1_006998
Bifunctional glutamate proline--tRNA ligase.
  
 0.958
BpHYR1_012581
Aspartate--tRNA mitochondrial isoform X1.
  
 0.901
BpHYR1_050961
Glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.880
BpHYR1_013526
Putative glutamate--tRNA mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.872
BpHYR1_001187
60S ribosomal L39.
  
 0.844
BpHYR1_019363
Putative asparagine--tRNA mitochondrial.
   
 0.824
BpHYR1_030114
Cytochrome c oxidase subunit mitochondrial-like; Belongs to the cytochrome c oxidase subunit 6A family.
    
 0.808
BpHYR1_033875
CAD-like isoform X3.
   
 
 0.790
BpHYR1_054215
Structure-specific endonuclease subunit SLX4.
   
 0.765
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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