STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_032040Alpha-ketoglutarate-dependent dioxygenase alkB-like protein. (245 aa)    
Predicted Functional Partners:
BpHYR1_052045
Afadin isoform X3.
    
  0.809
BpHYR1_043529
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
    0.640
BpHYR1_025182
Multifunctional methyltransferase subunit TRM112.
   
 
 0.634
BpHYR1_013344
Alpha-ketoglutarate-dependent dioxygenase alkB-like protein.
   
  
 0.633
BpHYR1_004129
Alpha-ketoglutarate-dependent dioxygenase alkB-like protein.
   
  
 0.568
BpHYR1_008503
NADH dehydrogenase [ubiquinone] iron-sulfur mitochondrial.
   
    0.567
BpHYR1_034007
Putative ATP-dependent RNA helicase YTHDC2.
     
 0.549
BpHYR1_042612
Alkylated DNA repair alkB-like protein.
      
 0.538
BpHYR1_006322
NCK-interacting with SH3 domain.
      
 0.532
BpHYR1_011815
Methyltransferase 14-like protein; Belongs to the MT-A70-like family.
   
  
 0.514
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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