STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_038941Nucleolar 58. (454 aa)    
Predicted Functional Partners:
BpHYR1_010588
WD repeat-containing 43-like.
   
 0.999
BpHYR1_019778
Cirhin.
   
 0.999
BpHYR1_020468
U3 small nucleolar RNA-associated 15-like protein.
   
 0.999
BpHYR1_009216
rRNA 2-O-methyltransferase fibrillarin.
   
 0.999
BpHYR1_009218
WD repeat-containing 75-like.
   
 0.999
BpHYR1_020350
U3 small nucleolar RNA-interacting 2 isoform X2.
   
 0.999
BpHYR1_054156
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
BpHYR1_000246
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
BpHYR1_013055
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
  
 0.999
BpHYR1_025758
HEAT repeat-containing 1.
   
 0.999
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.