STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_027368Transcription initiation factor TFIID subunit. (131 aa)    
Predicted Functional Partners:
BpHYR1_021134
Transcription initiation factor TFIID subunit 1 isoform X1.
    
 0.989
BpHYR1_025986
TAF6-like RNA polymerase II p300 CBP-associated factor-associated factor 65 kDa subunit 6L.
    
 0.989
BpHYR1_015023
Transcription initiation factor TFIID subunit 7.
    
 0.989
BpHYR1_041137
Transcription initiation factor TFIID subunit 11.
    
 0.989
BpHYR1_035022
Transcription initiation factor TFIID subunit 10-like.
    
 0.984
BpHYR1_016761
Transcription initiation factor TFIID subunit 9-like.
    
 0.984
BpHYR1_024698
Transcription initiation factor TFIID subunit; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.973
BpHYR1_011514
TATA-box-binding.
    
 0.960
BpHYR1_016264
TATA-box-binding.
    
 0.960
BpHYR1_023858
Transcription initiation factor TFIID subunit 10-like protein.
    
 0.960
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.