STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_017705CMP/dCMP-type deaminase domain-containing protein. (539 aa)    
Predicted Functional Partners:
BpHYR1_011926
Putative inactive tRNA-specific adenosine deaminase 3.
   
 0.980
BpHYR1_050853
Thymidylate synthase.
  
 
 0.889
BpHYR1_039071
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
  0.833
BpHYR1_019240
Ribonucleoside hydrolase.
   
 0.828
BpHYR1_005976
Thymidine kinase.
    
 0.819
BpHYR1_037102
Haloacid dehalogenase-like hydrolase domain-containing 3.
    
 0.804
BpHYR1_045056
Uracil phosphoribosyltransferase-like protein.
   
 0.791
BpHYR1_011706
Uracil phosphoribosyltransferase-like protein.
   
 0.791
BpHYR1_039873
Pseudouridine-metabolizing bifunctional-like.
    
  0.787
BpHYR1_037961
Thymidylate kinase.
  
 
 0.779
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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