STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_026025Ras-related Rab-41 isoform X1. (256 aa)    
Predicted Functional Partners:
BpHYR1_049687
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.970
BpHYR1_006170
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.970
BpHYR1_045434
Vam6 Vps39 isoform X2.
    
 
 0.969
BpHYR1_021814
GRIP and coiled-coil domain-containing 2.
    
 0.964
BpHYR1_020132
ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
   
 0.957
BpHYR1_033656
Bicaudal D-like protein.
    
 0.937
BpHYR1_011488
Bicaudal D-like.
    
 0.937
BpHYR1_050506
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.924
BpHYR1_003784
Vacuolar sorting-associated 33A; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.923
BpHYR1_017234
Vacuolar sorting-associated 33B; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.923
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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