STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_018571Ras-related Rab-11A. (173 aa)    
Predicted Functional Partners:
BpHYR1_008714
Intersectin-1 isoform X7.
    
 0.949
BpHYR1_008715
Intersectin-2 isoform X1.
    
 0.949
BpHYR1_013209
Rab11 family-interacting 4 isoform X2.
    
 0.914
BpHYR1_006593
Putative serine threonine-kinase pats1.
  
 0.911
BpHYR1_035183
Leucine-rich repeat serine threonine-kinase 1.
  
 0.911
BpHYR1_043766
Phosphatidylinositol 4-kinase beta isoform X3; Belongs to the PI3/PI4-kinase family.
    
 0.875
BpHYR1_039495
Guanine nucleotide exchange factor for Rab-3A isoform X5.
    
 0.867
BpHYR1_040432
Unconventional myosin-Vb isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.864
BpHYR1_025469
SH3 and multiple ankyrin repeat domains 3-like isoform X3.
   
 0.860
BpHYR1_030790
Muscle M-line assembly unc-89 isoform X7.
   
 0.847
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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