STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_014321Decapping and exoribonuclease. (541 aa)    
Predicted Functional Partners:
BpHYR1_045939
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.957
BpHYR1_010182
5-3 exoribonuclease 2.
   
 
 0.956
BpHYR1_005372
Fas-binding factor.
    
 
 0.944
BpHYR1_006547
Regulation of nuclear pre-mRNA domain-containing 1B-like isoform X1.
    
 
 0.944
BpHYR1_045010
Uncharacterized protein.
    
 
 0.811
BpHYR1_046099
Regulation of nuclear pre-mRNA domain-containing 2-like.
    
 
 0.811
BpHYR1_015644
Polynucleotide 5-hydroxyl-kinase NOL9.
   
 
 0.704
BpHYR1_051361
Helicase SKI2W.
   
 
 0.603
BpHYR1_014474
mRNA cap guanine-N7 methyltransferase.
    
 
 0.594
BpHYR1_011313
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
   0.593
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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