STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_008959F-box LRR-repeat. (646 aa)    
Predicted Functional Partners:
BpHYR1_006647
S-phase kinase-associated 1; Belongs to the SKP1 family.
    
 0.904
BpHYR1_017504
Cullin; Belongs to the cullin family.
    
 0.662
BpHYR1_000445
Cullin-3 isoform X1; Belongs to the cullin family.
    
 0.662
BpHYR1_030376
Cullin-1; Belongs to the cullin family.
    
 0.662
BpHYR1_009952
RING-box 1A.
     
 0.618
BpHYR1_054611
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.604
BpHYR1_013548
UV excision repair RAD23-like protein.
    
  0.565
BpHYR1_024954
Cullin-2; Belongs to the cullin family.
    
  0.551
BpHYR1_018705
Cullin-2; Belongs to the cullin family.
    
  0.551
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.518
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.