STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_048723E3 ubiquitin-ligase MARCH5. (296 aa)    
Predicted Functional Partners:
BpHYR1_028858
Mitofusin-2 isoform X1.
    
 
 0.642
BpHYR1_028859
Transmembrane GTPase Marf.
    
 
 0.642
BpHYR1_012897
Transmembrane GTPase Marf isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.557
BpHYR1_044309
Dynamin-like 120 kDa mitochondrial-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.421
BpHYR1_037434
Ubiquitin-conjugating enzyme E2 E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.419
BpHYR1_011487
Ubiquitin-conjugating enzyme E2 W.
   
   0.412
BpHYR1_050896
Dynamin-1 isoform X2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.407
BpHYR1_037100
Dynamin isoform X6; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.407
BpHYR1_037099
Dynamin isoform X9.
    
 
 0.407
BpHYR1_037101
Dynamin isoform X6; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 
 0.407
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.