STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_021344Retrovirus-related Pol poly from transposon. (487 aa)    
Predicted Functional Partners:
BpHYR1_017784
Adenylate kinase 9.
    
  0.850
BpHYR1_017782
Adenylate kinase 9-like.
    
  0.850
BpHYR1_001873
Adenylate kinase 9.
    
  0.850
BpHYR1_006593
Putative serine threonine-kinase pats1.
    
 0.815
BpHYR1_035183
Leucine-rich repeat serine threonine-kinase 1.
    
 0.815
BpHYR1_030790
Muscle M-line assembly unc-89 isoform X7.
   
 0.794
BpHYR1_046798
Muscle M-line assembly unc-89.
   
 0.794
BpHYR1_029124
Muscle M-line assembly unc-89-like.
   
 0.794
BpHYR1_020072
Titin isoform X5.
   
 0.794
BpHYR1_020076
Muscle M-line assembly unc-89.
   
 0.794
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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