STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_014491Tetratricopeptide repeat 30A. (451 aa)    
Predicted Functional Partners:
BpHYR1_037933
Intraflagellar transport 88-like protein.
    
 0.965
BpHYR1_007624
Intraflagellar transport 52-like protein.
    
 0.965
BpHYR1_030102
Intraflagellar transport 56 isoform X1.
    
 0.964
BpHYR1_039200
Intraflagellar transport 81-like protein.
    
 0.956
BpHYR1_015648
Clusterin-associated 1.
   
 0.944
BpHYR1_012020
Intraflagellar transport 172-like protein.
   
 0.943
BpHYR1_031318
Intraflagellar transport 80-like protein.
    
 0.943
BpHYR1_017885
Intraflagellar transport 57-like protein.
   
 0.941
BpHYR1_027575
Intraflagellar transport 46-like protein.
    
 0.938
BpHYR1_048424
TRAF3-interacting 1 isoform X1.
    
 0.938
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.