STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_032757Nuclear export mediator factor NEMF. (683 aa)    
Predicted Functional Partners:
BpHYR1_046095
E3 ubiquitin-ligase listerin.
    
 
 0.929
BpHYR1_013799
60S ribosomal L11; Belongs to the universal ribosomal protein uL5 family.
  
   0.864
BpHYR1_044599
60S ribosomal L23; Belongs to the universal ribosomal protein uL14 family.
   
   0.859
BpHYR1_020150
60S ribosomal L17; Belongs to the universal ribosomal protein uL22 family.
   
   0.855
BpHYR1_041184
60S ribosomal L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.855
BpHYR1_001383
60s ribosomal l35.
   
   0.854
BpHYR1_042419
60S ribosomal L7-like.
    
 
 0.853
BpHYR1_051391
39S ribosomal mitochondrial.
   
   0.768
BpHYR1_045283
60S ribosomal L13A.
   
   0.768
BpHYR1_036071
60S ribosomal L8.
   
   0.762
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.