STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_002701L-seryl-tRNA(Sec) kinase. (361 aa)    
Predicted Functional Partners:
BpHYR1_045354
Serine--tRNA cytoplasmic.
     
 0.926
BpHYR1_020133
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
     
 0.926
BpHYR1_003588
Serine--tRNA mitochondrial-like.
     
 0.912
BpHYR1_003940
Histidine decarboxylase isoform X1.
     
 0.688
BpHYR1_029114
Glutamate decarboxylase.
     
 0.688
BpHYR1_029321
Tyrosine decarboxylase.
     
 0.688
BpHYR1_046098
Sphingosine-1-phosphate lyase 1.
     
 0.688
BpHYR1_029106
Tyrosine decarboxylase-like.
     
 0.688
BpHYR1_014211
Glutamate decarboxylase.
     
 0.688
BpHYR1_043670
Dopa decarboxylase.
     
 0.688
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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