STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_048546AP-like endonuclease reverse transcriptase. (186 aa)    
Predicted Functional Partners:
BpHYR1_003646
Growth differentiation factor 3.
    
 0.780
BpHYR1_054568
Bone morphogenetic 3.
    
 0.780
BpHYR1_025048
TGF_BETA_2 domain-containing protein.
    
 0.780
BpHYR1_002263
Inhibin beta B.
    
 0.780
BpHYR1_048466
Epidermal growth factor receptor.
    
 0.458
BpHYR1_003751
Plasminogen; Belongs to the peptidase S1 family.
    
  0.406
BpHYR1_026531
Chymotrypsin-like protease CTRL-1; Belongs to the peptidase S1 family.
    
  0.406
BpHYR1_030080
Serine protease 27-like; Belongs to the peptidase S1 family.
    
  0.406
BpHYR1_029297
Chymotrypsin-like protease CTRL-1.
    
  0.406
BpHYR1_038681
Transmembrane protease serine; Belongs to the peptidase S1 family.
    
  0.406
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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