STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_037683E3 ubiquitin-ligase. (558 aa)    
Predicted Functional Partners:
BpHYR1_006593
Putative serine threonine-kinase pats1.
    
 0.745
BpHYR1_035183
Leucine-rich repeat serine threonine-kinase 1.
    
 0.745
BpHYR1_000098
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
  0.668
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
    
 0.661
BpHYR1_026180
Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.655
BpHYR1_026973
Tonsoku.
    
 0.584
BpHYR1_000503
Eyes shut-like protein.
    
 0.580
BpHYR1_041861
Neurogenic locus notch-like protein.
    
  0.575
BpHYR1_006953
Neurogenic locus notch.
    
  0.575
BpHYR1_031621
Crumbs isoform X2.
    
  0.575
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.