STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_048672Glutamyl aminopeptidase. (1059 aa)    
Predicted Functional Partners:
BpHYR1_041095
Dihydrolipoyl dehydrogenase.
  
 0.681
BpHYR1_028444
Thioredoxin reductase 3; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 0.676
BpHYR1_041921
Aspartate cytoplasmic.
   
 0.625
BpHYR1_028120
Aspartate aminotransferase.
   
 0.625
BpHYR1_040622
Putative aminopeptidase NPEPL1.
  
 0.621
BpHYR1_033038
Cytosolic non-specific dipeptidase.
   
 0.612
BpHYR1_019347
Serine cytosolic-like.
    
 0.605
BpHYR1_029135
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.605
BpHYR1_049356
Cystathionine gamma-lyase-like.
  
 
 0.555
BpHYR1_035896
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
     
 0.539
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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