STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_041926Cyclin-dependent kinase 2-associated 1-like. (186 aa)    
Predicted Functional Partners:
BpHYR1_040614
Methyl--binding domain 2.
   
 
 0.877
BpHYR1_050752
Metastasis-associated MTA3 isoform X2.
    
 
 0.782
BpHYR1_001181
PHD finger 20 1 isoform X3.
   
 
 0.706
BpHYR1_050423
Chromodomain-helicase-DNA-binding 4.
    
 
 0.692
BpHYR1_010947
CHDCT2 domain.
    
 
 0.692
BpHYR1_046500
Transposon Ty3-G Gag-Pol poly.
    
 
 0.682
BpHYR1_029133
Pol.
    
 
 0.682
BpHYR1_014087
Histone-binding RBBP4 isoform X2.
   
 
 0.678
BpHYR1_004147
Histone-binding RBBP4 isoform X2.
   
 
 0.678
BpHYR1_002696
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 
 0.643
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.