STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_016087Peroxisomal biogenesis factor 3. (392 aa)    
Predicted Functional Partners:
BpHYR1_011399
Peroxisomal biogenesis factor 19.
    
 0.998
BpHYR1_038570
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 0.961
BpHYR1_017733
Peroxisome biogenesis factor 13.
   
 0.959
BpHYR1_012247
Peroxisomal membrane 11C.
   
 0.920
BpHYR1_019540
ATP-binding cassette sub-family D member 3 isoform X1.
   
 0.903
BpHYR1_032123
Peroxisomal membrane protein PEX16.
    
 0.878
BpHYR1_021463
Peroxisomal membrane protein PEX16.
    
 0.878
BpHYR1_032971
Peroxisome biogenesis factor 2.
   
 
 0.858
BpHYR1_050523
ATP-binding cassette sub-family D member 2.
   
 0.845
BpHYR1_019906
ATP-binding cassette sub-family D member 4 isoform X1.
   
 0.840
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.