STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_035917WD repeat-containing 48 isoform X2. (732 aa)    
Predicted Functional Partners:
BpHYR1_054256
Ubiquitin carboxyl-terminal hydrolase.
   
 0.998
BpHYR1_015303
WD repeat-containing 20.
    
 0.995
BpHYR1_007123
Fanconi anemia group I.
    
 0.987
BpHYR1_038133
Uncharacterized protein.
    
 0.971
BpHYR1_049600
Putative trichohyalin-like.
    
 0.971
BpHYR1_041824
Ubiquitin-60S ribosomal L40.
    
  0.950
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.908
BpHYR1_013463
AN1-type zinc finger 4 isoform X1.
    
 0.908
BpHYR1_009206
ATPase family AAA domain-containing 5.
   
 0.894
BpHYR1_018821
E3 ubiquitin-ligase FANCL.
     
 0.887
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.