STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_018102Sentrin-specific protease 5. (418 aa)    
Predicted Functional Partners:
BpHYR1_028313
Small ubiquitin-related modifier.
   
 0.913
BpHYR1_035041
Sentrin-specific protease 7 isoform X4.
    
 0.829
BpHYR1_019863
Importin-5.
    
 
 0.775
BpHYR1_041485
Testis-expressed sequence 10 isoform X1.
    
 0.733
BpHYR1_047479
Ribosomal biogenesis LAS1L.
   
 0.732
BpHYR1_029464
WD repeat-containing 18.
    
 0.723
BpHYR1_015644
Polynucleotide 5-hydroxyl-kinase NOL9.
   
 0.679
BpHYR1_006509
Nuclear pore complex protein Nup153-like.
   
 0.679
BpHYR1_035899
Nuclear pore complex protein Nup153-like.
   
 0.679
BpHYR1_016932
Segment polarity dishevelled-like protein.
    
  0.667
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.