STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_031795tRNA-splicing endonuclease subunit Sen34. (399 aa)    
Predicted Functional Partners:
BpHYR1_021457
tRNA-splicing endonuclease subunit Sen2.
    
 0.976
BpHYR1_036352
tRNA-splicing endonuclease subunit Sen54.
   
 0.921
BpHYR1_014304
CLP1-like protein.
    
 0.843
BpHYR1_014305
CLP1-like protein.
    
 0.764
BpHYR1_002385
DNA-directed RNA polymerase III subunit RPC5 isoform X2.
   
    0.661
BpHYR1_034435
tRNA-splicing ligase-like protein.
    
 0.637
BpHYR1_006442
tRNA-splicing ligase-like protein.
    
 0.637
BpHYR1_017058
tRNA 2-phosphotransferase 1.
      
 0.588
BpHYR1_052251
Ribonuclease mitochondrial.
  
  
 0.580
BpHYR1_027267
Zinc phosphodiesterase ELAC 1.
  
  
 0.566
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.